Pesquisa | Portal de Pesquisa da BVS Enfermagem

1.

Microbiota Diurnal Rhythmicity Programs Host Transcriptome Oscillations.

Thaiss, Christoph A; Levy, Maayan; Korem, Tal; Dohnalová, Lenka; Shapiro, Hagit; Jaitin, Diego A; David, Eyal; Winter, Deborah R; Gury-BenAri, Meital; Tatirovsky, Evgeny; Tuganbaev, Timur; Federici, Sara; Zmora, Niv; Zeevi, David; Dori-Bachash, Mally; Pevsner-Fischer, Meirav; Kartvelishvily, Elena; Brandis, Alexander; Harmelin, Alon; Shibolet, Oren; Halpern, Zamir; Honda, Kenya; Amit, Ido; Segal, Eran; Elinav, Eran.

Cell ; 167(6): 1495-1510.e12, 2016 Dec 01.

Artigo em Inglês | MEDLINE | ID: mdl-27912059

2.

The Spectrum and Regulatory Landscape of Intestinal Innate Lymphoid Cells Are Shaped by the Microbiome.

Gury-BenAri, Meital; Thaiss, Christoph A; Serafini, Nicolas; Winter, Deborah R; Giladi, Amir; Lara-Astiaso, David; Levy, Maayan; Salame, Tomer Meir; Weiner, Assaf; David, Eyal; Shapiro, Hagit; Dori-Bachash, Mally; Pevsner-Fischer, Meirav; Lorenzo-Vivas, Erika; Keren-Shaul, Hadas; Paul, Franziska; Harmelin, Alon; Eberl, Gérard; Itzkovitz, Shalev; Tanay, Amos; Di Santo, James P; Elinav, Eran; Amit, Ido.

Cell ; 166(5): 1231-1246.e13, 2016 Aug 25.

Artigo em Inglês | MEDLINE | ID: mdl-27545347

3.

The role of the local environment and epigenetics in shaping macrophage identity and their effect on tissue homeostasis.

Amit, Ido; Winter, Deborah R; Jung, Steffen.

Nat Immunol ; 17(1): 18-25, 2016 Jan.

Artigo em Inglês | MEDLINE | ID: mdl-26681458

4.

Corrigendum: The role of the local environment and epigenetics in shaping macrophage identity and their effect on tissue homeostasis.

Amit, Ido; Winter, Deborah R; Jung, Steffen.

Nat Immunol ; 18(2): 246, 2017 01 19.

Artigo em Inglês | MEDLINE | ID: mdl-28102219

5.

A Novel MIP-1-Expressing Macrophage Subtype in BAL Fluid from Healthy Volunteers.

Reyfman, Paul A; Malsin, Elizabeth S; Khuder, Basil; Joshi, Nikita; Gadhvi, Gaurav; Flozak, Annette S; Carns, Mary A; Aren, Kathleen; Goldberg, Isaac A; Kim, Seokjo; Alexander, Michael; Sporn, Peter H S; Misharin, Alexander V; Budinger, G R Scott; Lam, Anna P; Hinchcliff, Monique; Gottardi, Cara J; Winter, Deborah R.

Am J Respir Cell Mol Biol ; 68(2): 176-185, 2023 02.

Artigo em Inglês | MEDLINE | ID: mdl-36174229

6.

DCs are ready to commit.

Winter, Deborah R; Amit, Ido.

Nat Immunol ; 16(7): 683-5, 2015 Jul.

Artigo em Inglês | MEDLINE | ID: mdl-26086135

7.

Activation of the 15-lipoxygenase pathway in aspirin-exacerbated respiratory disease.

Stevens, Whitney W; Staudacher, Anna G; Hulse, Kathryn E; Carter, Roderick G; Winter, Deborah R; Abdala-Valencia, Hiam; Kato, Atsushi; Suh, Lydia; Norton, James E; Huang, Julia H; Peters, Anju T; Grammer, Leslie C; Price, Caroline P E; Conley, David B; Shintani-Smith, Stephanie; Tan, Bruce K; Welch, Kevin C; Kern, Robert C; Schleimer, Robert P.

J Allergy Clin Immunol ; 147(2): 600-612, 2021 02.

Artigo em Inglês | MEDLINE | ID: mdl-32371071

8.

Microglia Adopt Longitudinal Transcriptional Changes After Traumatic Brain Injury.

Makinde, Hadijat M; Just, Talia B; Gadhvi, Gaurav T; Winter, Deborah R; Schwulst, Steven J.

J Surg Res ; 246: 113-122, 2020 02.

Artigo em Inglês | MEDLINE | ID: mdl-31563831

9.

Single-Cell Transcriptomic Analysis of Human Lung Provides Insights into the Pathobiology of Pulmonary Fibrosis.

Reyfman, Paul A; Walter, James M; Joshi, Nikita; Anekalla, Kishore R; McQuattie-Pimentel, Alexandra C; Chiu, Stephen; Fernandez, Ramiro; Akbarpour, Mahzad; Chen, Ching-I; Ren, Ziyou; Verma, Rohan; Abdala-Valencia, Hiam; Nam, Kiwon; Chi, Monica; Han, SeungHye; Gonzalez-Gonzalez, Francisco J; Soberanes, Saul; Watanabe, Satoshi; Williams, Kinola J N; Flozak, Annette S; Nicholson, Trevor T; Morgan, Vince K; Winter, Deborah R; Hinchcliff, Monique; Hrusch, Cara L; Guzy, Robert D; Bonham, Catherine A; Sperling, Anne I; Bag, Remzi; Hamanaka, Robert B; Mutlu, Gökhan M; Yeldandi, Anjana V; Marshall, Stacy A; Shilatifard, Ali; Amaral, Luis A N; Perlman, Harris; Sznajder, Jacob I; Argento, A Christine; Gillespie, Colin T; Dematte, Jane; Jain, Manu; Singer, Benjamin D; Ridge, Karen M; Lam, Anna P; Bharat, Ankit; Bhorade, Sangeeta M; Gottardi, Cara J; Budinger, G R Scott; Misharin, Alexander V.

Am J Respir Crit Care Med ; 199(12): 1517-1536, 2019 06 15.

Artigo em Inglês | MEDLINE | ID: mdl-30554520

10.

Lipocalin-2 is a pathogenic determinant and biomarker of neuropsychiatric lupus.

Mike, Elise V; Makinde, Hadijat M; Gulinello, Maria; Vanarsa, Kamala; Herlitz, Leal; Gadhvi, Gaurav; Winter, Deborah R; Mohan, Chandra; Hanly, John G; Mok, C C; Cuda, Carla M; Putterman, Chaim.

J Autoimmun ; 96: 59-73, 2019 01.

Artigo em Inglês | MEDLINE | ID: mdl-30174216

11.

A Beginner's Guide to Analysis of RNA Sequencing Data.

Koch, Clarissa M; Chiu, Stephen F; Akbarpour, Mahzad; Bharat, Ankit; Ridge, Karen M; Bartom, Elizabeth T; Winter, Deborah R.

Am J Respir Cell Mol Biol ; 59(2): 145-157, 2018 08.

Artigo em Inglês | MEDLINE | ID: mdl-29624415

12.

The role of chromatin dynamics in immune cell development.

Winter, Deborah R; Amit, Ido.

Immunol Rev ; 261(1): 9-22, 2014 Sep.

Artigo em Inglês | MEDLINE | ID: mdl-25123274

13.

DNase-seq predicts regions of rotational nucleosome stability across diverse human cell types.

Winter, Deborah R; Song, Lingyun; Mukherjee, Sayan; Furey, Terrence S; Crawford, Gregory E.

Genome Res ; 23(7): 1118-29, 2013 Jul.

Artigo em Inglês | MEDLINE | ID: mdl-23657885

14.

Transcription initiation patterns indicate divergent strategies for gene regulation at the chromatin level.

Rach, Elizabeth A; Winter, Deborah R; Benjamin, Ashlee M; Corcoran, David L; Ni, Ting; Zhu, Jun; Ohler, Uwe.

PLoS Genet ; 7(1): e1001274, 2011 Jan 13.

Artigo em Inglês | MEDLINE | ID: mdl-21249180

15.

MAGNET: A web-based application for gene set enrichment analysis using macrophage data sets.

Chen, Shang-Yang; Gadhvi, Gaurav; Winter, Deborah R.

PLoS One ; 18(1): e0272166, 2023.

Artigo em Inglês | MEDLINE | ID: mdl-36630461

16.

Suprabasal cells retaining stem cell identity programs drive basal cell hyperplasia in eosinophilic esophagitis.

Clevenger, Margarette H; Karami, Adam L; Carlson, Dustin A; Kahrilas, Peter J; Gonsalves, Nirmala; Pandolfino, John E; Winter, Deborah R; Whelan, Kelly A; Tétreault, Marie-Pier.

bioRxiv ; 2023 Apr 20.

Artigo em Inglês | MEDLINE | ID: mdl-37131652

17.

Suprabasal cells retain progenitor cell identity programs in eosinophilic esophagitis-driven basal cell hyperplasia.

Clevenger, Margarette H; Karami, Adam L; Carlson, Dustin A; Kahrilas, Peter J; Gonsalves, Nirmala; Pandolfino, John E; Winter, Deborah R; Whelan, Kelly A; Tétreault, Marie-Pier.

JCI Insight ; 8(19)2023 10 09.

Artigo em Inglês | MEDLINE | ID: mdl-37672481

18.

Single-cell sequencing of a novel model of neonatal bile duct ligation in mice identifies macrophage heterogeneity in obstructive cholestasis.

Antala, Swati; Gromer, Kyle D; Gadhvi, Gaurav; Kriegermeier, Alyssa; Wang, Jiao-Jing; Abdala-Valencia, Hiam; Wechsler, Joshua B; Perlman, Harris; Winter, Deborah R; Zhang, Zheng J; Green, Richard M; Taylor, Sarah A.

Sci Rep ; 13(1): 14104, 2023 08 29.

Artigo em Inglês | MEDLINE | ID: mdl-37644108

19.

Three Distinct Transcriptional Profiles of Monocytes Associate with Disease Activity in Scleroderma Patients.

Makinde, Hadijat-Kubura M; Dunn, Julia L M; Gadhvi, Gaurav; Carns, Mary; Aren, Kathleen; Chung, Anh H; Muhammad, Lutfiyya N; Song, Jing; Cuda, Carla M; Dominguez, Salina; Pandolfino, John E; Dematte D'Amico, Jane E; Budinger, G Scott; Assassi, Shervin; Frech, Tracy M; Khanna, Dinesh; Shaeffer, Alex; Perlman, Harris; Hinchcliff, Monique; Winter, Deborah R.

Arthritis Rheumatol ; 75(4): 595-608, 2023 04.

Artigo em Inglês | MEDLINE | ID: mdl-36281773

20.

Tissue-resident, extravascular Ly6c^- monocytes are critical for inflammation in the synovium.

Montgomery, Anna B; Chen, Shang Yang; Wang, Yidan; Gadhvi, Gaurav; Mayr, Maximilian G; Cuda, Carla M; Dominguez, Salina; Moradeke Makinde, Hadijat-Kubura; Gurra, Miranda G; Misharin, Alexander V; Mandelin, Arthur M; Ruderman, Eric M; Thakrar, Anjali; Brar, Simran; Carns, Mary; Aren, Kathleen; Akbarpour, Mahzad; Filer, Andrew; Nayar, Saba; Teososio, Ana; Major, Triin; Bharat, Ankit; Budinger, G R Scott; Winter, Deborah R; Perlman, Harris.

Cell Rep ; 42(5): 112513, 2023 05 30.

Artigo em Inglês | MEDLINE | ID: mdl-37204925

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